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PD output for OOPS CL vs NC using SILAC labelled U-2 OS cells

raw_OOPS_SILAC_data.Rd

For replicates 1 & 2: H=CL, L=NC

Details

For replicates 3 & 4: H=CL, L=NC

OOPS_SILAC/OOPS_*_PSMs.txt

These are PSM-level outputs from PD

OOPS_SILAC/OOPS_*_PeptideGroups.txt

These are Peptide-level outputs from PD